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    LOC100284029 uncharacterized LOC100284029 [ Zea mays ]

    Gene ID: 100284029, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100284029
    Gene description
    uncharacterized LOC100284029
    Locus tag
    ZEAMMB73_Zm00001d015956
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    gpm720; GRMZM2G179981
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    Genomic context

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    See LOC100284029 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 5 NC_050100.1 (133621425..133629880)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 5 NC_024463.2 (134163807..134172258)

    Chromosome 5 - NC_050100.1Genomic Context describing neighboring genes Neighboring gene UDP-sugar pyrophosphorylase Neighboring gene Topoisomerase II-associated protein PAT1 Neighboring gene uncharacterized LOC103626900 Neighboring gene SGNH hydrolase-type esterase superfamily protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    2. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Cinnamoyl-CoA reductase 1
    Names
    NAD(P)-binding Rossmann-fold superfamily protein
    PCO149989
    dihydroflavonol-4-reductase
    gnp_QCO15h05
    NP_001150399.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001156927.1 → NP_001150399.1  Cinnamoyl-CoA reductase 1

      See identical proteins and their annotated locations for NP_001150399.1

      Status: PROVISIONAL

      Source sequence(s)
      EU966822
      UniProtKB/TrEMBL
      B4G1Y5, B6TPA7
      Conserved Domains (2) summary
      PLN02650
      Location:16 → 329
      PLN02650; dihydroflavonol-4-reductase
      PLN02662
      Location:14 → 331
      PLN02662; cinnamyl-alcohol dehydrogenase family protein

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      133621425..133629880
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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