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    LOC100279306 putative regulator of chromosome condensation (RCC1) family protein [ Zea mays ]

    Gene ID: 100279306, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC100279306
    Gene description
    putative regulator of chromosome condensation (RCC1) family protein
    Locus tag
    ZEAMMB73_Zm00001d050985
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G152616
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    Genomic context

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    See LOC100279306 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 4 NC_050099.1 (137182213..137185513, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 4 NC_024462.2 (135266797..135270006, complement)

    Chromosome 4 - NC_050099.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111591311 Neighboring gene rab escort protein 1-like Neighboring gene uncharacterized LOC118476952 Neighboring gene uncharacterized LOC103653724

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
    2. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    3. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    4. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    • PZA00151_Zea_mays_ssp._parviglumis_Beadle_&_Kato_site_4 (e-PCR)

    Homology

    General protein information

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    Preferred Names
    putative regulator of chromosome condensation (RCC1) family protein
    Names
    Regulator of chromosome condensation (RCC1) family protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001152327.1 → NP_001145799.1  putative regulator of chromosome condensation (RCC1) family protein

      See identical proteins and their annotated locations for NP_001145799.1

      Status: PROVISIONAL

      Source sequence(s)
      BT054005
      UniProtKB/TrEMBL
      A0A1D6Q4C3, B4FSP2
      Conserved Domains (1) summary
      cl27697
      Location:151 → 531
      RCC1; Regulator of chromosome condensation (RCC1) repeat

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050099.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      137182213..137185513 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008678858.4 → XP_008677080.1  putative regulator of chromosome condensation (RCC1) family protein isoform X1

      See identical proteins and their annotated locations for XP_008677080.1

      UniProtKB/TrEMBL
      A0A1D6Q4C3, B4FSP2
      Conserved Domains (1) summary
      cl27697
      Location:151 → 531
      RCC1; Regulator of chromosome condensation (RCC1) repeat

    2. XM_008678859.3 → XP_008677081.1  putative regulator of chromosome condensation (RCC1) family protein isoform X1

      See identical proteins and their annotated locations for XP_008677081.1

      UniProtKB/TrEMBL
      A0A1D6Q4C3, B4FSP2
      Conserved Domains (1) summary
      cl27697
      Location:151 → 531
      RCC1; Regulator of chromosome condensation (RCC1) repeat
    Nucleotide Protein
    Heading Accession and Version

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