U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC100253405 uncharacterized LOC100253405 [ Vitis vinifera (wine grape) ]

    Gene ID: 100253405, updated on 23-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100253405
    Gene description
    uncharacterized LOC100253405
    Locus tag
    VIT_00037255001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100253405 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 6 NC_081810.1 (19918368..19921092)
    102 previous assembly 12X (GCF_000003745.3) 6 NC_012012.3 (16879449..16882197)

    Chromosome 6 - NC_081810.1Genomic Context describing neighboring genes Neighboring gene F-box protein At3g07870 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene uncharacterized LOC104879644 Neighboring gene protein PATRONUS 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein import into mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein insertion into mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TIM23 mitochondrial import inner membrane translocase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC100253405
    Names
    reactive oxygen species modulator 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081810.1 Reference ASM3070453v1 Primary Assembly

      Range
      19918368..19921092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002279733.5 → XP_002279769.1  uncharacterized protein LOC100253405

      See identical proteins and their annotated locations for XP_002279769.1

      UniProtKB/TrEMBL
      D7T147
      Conserved Domains (1) summary
      pfam10247
      Location:28 → 70
      Romo1; Reactive mitochondrial oxygen species modulator 1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials