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    LOC100255385 uncharacterized LOC100255385 [ Vitis vinifera (wine grape) ]

    Gene ID: 100255385, updated on 29-Sep-2023

    Summary

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    Gene symbol
    LOC100255385
    Gene description
    uncharacterized LOC100255385
    Locus tag
    VIT_00024926001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100255385 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 6 NC_081810.1 (5992852..5994407)
    102 previous assembly 12X (GCF_000003745.3) 6 NC_012012.3 (5967080..5968659)

    Chromosome 6 - NC_081810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C24B11.05 Neighboring gene ATP-dependent zinc metalloprotease FTSH 10, mitochondrial Neighboring gene abscisic acid 8'-hydroxylase 2 Neighboring gene zinc transporter 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article
    2. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
    3. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100255385

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081810.1 Reference ASM3070453v1 Primary Assembly

      Range
      5992852..5994407
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002280697.4 → XP_002280733.1  uncharacterized protein LOC100255385

      UniProtKB/TrEMBL
      A0A438FBF2, F6GUZ5
      Conserved Domains (1) summary
      COG2020
      Location:314 → 396
      STE14; Protein-S-isoprenylcysteine O-methyltransferase Ste14 [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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