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    LOC100261316 probable receptor-like protein kinase At5g18500 [ Vitis vinifera (wine grape) ]

    Gene ID: 100261316, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100261316
    Gene description
    probable receptor-like protein kinase At5g18500
    Locus tag
    VIT_00017681001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100261316 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 5 NC_081809.1 (2803872..2808856, complement)
    102 previous assembly 12X (GCF_000003745.3) 5 NC_012011.3 (2592608..2597545, complement)

    Chromosome 5 - NC_081809.1Genomic Context describing neighboring genes Neighboring gene squamosa promoter-binding-like protein 1 Neighboring gene pto-interacting protein 1 Neighboring gene probable sugar phosphate/phosphate translocator At1g48230 Neighboring gene novel plant SNARE 13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable receptor-like protein kinase At5g18500

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081809.1 Reference ASM3070453v1 Primary Assembly

      Range
      2803872..2808856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002267234.4 → XP_002267270.1  probable receptor-like protein kinase At5g18500

      See identical proteins and their annotated locations for XP_002267270.1

      UniProtKB/TrEMBL
      A0A438F7H2, D7T685
      Conserved Domains (2) summary
      smart00221
      Location:184 → 454
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:189 → 455
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    2. XM_010651377.3 → XP_010649679.1  probable receptor-like protein kinase At5g18500

      See identical proteins and their annotated locations for XP_010649679.1

      UniProtKB/TrEMBL
      A0A438F7H2, D7T685
      Conserved Domains (2) summary
      smart00221
      Location:184 → 454
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:189 → 455
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    Nucleotide Protein
    Heading Accession and Version

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