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    LOC100254379 protein PEROXIN-4 [ Vitis vinifera (wine grape) ]

    Gene ID: 100254379, updated on 29-Sep-2023

    Summary

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    Gene symbol
    LOC100254379
    Gene description
    protein PEROXIN-4
    Locus tag
    VIT_00035654001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100254379 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 4 NC_081808.1 (3047188..3052763, complement)
    102 previous assembly 12X (GCF_000003745.3) 4 NC_012010.3 (3045339..3050647, complement)

    Chromosome 4 - NC_081808.1Genomic Context describing neighboring genes Neighboring gene protein tesmin/TSO1-like CXC 6 Neighboring gene uncharacterized LOC100259497 Neighboring gene protein NONRESPONDING TO OXYLIPINS 2, mitochondrial Neighboring gene TOM1-like protein 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein PEROXIN-4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081808.1 Reference ASM3070453v1 Primary Assembly

      Range
      3047188..3052763 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002284026.5 → XP_002284062.1  protein PEROXIN-4

      See identical proteins and their annotated locations for XP_002284062.1

      UniProtKB/TrEMBL
      A0A438C225, D7SUC9
      Conserved Domains (1) summary
      pfam00179
      Location:7 → 148
      UQ_con; Ubiquitin-conjugating enzyme

    2. XM_002284032.5 → XP_002284068.1  protein PEROXIN-4

      See identical proteins and their annotated locations for XP_002284068.1

      UniProtKB/TrEMBL
      A0A438C225, D7SUC9
      Conserved Domains (1) summary
      pfam00179
      Location:7 → 148
      UQ_con; Ubiquitin-conjugating enzyme
    Nucleotide Protein
    Heading Accession and Version

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