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    L2 core protein V;core protein precursor pVII;core protein precursor pX;penton base [ Human mastadenovirus A ]

    Gene ID: 1460868, updated on 18-Aug-2023

    Summary

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    Gene symbol
    L2
    Gene description
    core protein V;core protein precursor pVII;core protein precursor pX;penton base
    Locus tag
    HAdVAgp09
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Human mastadenovirus A (strain: Huie, serotype: Human adenovirus 12, acronym: HAdV-12, acronym: HAdV-A, nat-host: Homo sapiens, culture-collection: ATCC:VR-863)
    Lineage
    Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus
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    Genomic context

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    Sequence:
    NC_001460.1 (5771..16797)

    NC_001460.1Genomic Context describing neighboring genes Neighboring gene control protein E1B 19K;control protein E1B 55K Neighboring gene encapsidation protein IVa2 Neighboring gene capsid protein IX Neighboring gene DNA polymerase;terminal protein precursor pTP Neighboring gene capsid protein precursor pIIIa;encapsidation protein 52K;protein 13.6K Neighboring gene capsid protein precursor pVI;hexon;protease Neighboring gene capsid protein precursor pVIII;encapsidation protein 22K;hexon assembly protein 100K;protein 33K Neighboring gene fiber Neighboring gene miscRNA Neighboring gene Neighboring gene single-stranded DNA-binding protein Neighboring gene control protein E3 12.5K;control protein E3 14.7K;membrane glycoprotein E3 CR1-alpha;membrane glycoprotein E3 CR1-beta;membrane protein E3 RID-alpha;membrane protein E3 RID-beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001460.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence of human adenovirus type 12 DNA: comparative functional analysis. Sprengel J, et al. J Virol, 1994 Jan. PMID 8254750, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    regulatory

    • Loc: 13323-13328 regulatory_class = polyA_signal_sequence
    • Loc: 16787-16792 regulatory_class = polyA_signal_sequence
    • Loc: 16792-16797 regulatory_class = polyA_signal_sequence
    • Loc: 5771-5776 regulatory_class = TATA_box

    General protein information

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    Preferred Names
    core protein V;core protein precursor pVII;core protein precursor pX;penton base
    NP_040920.1
    • genus-common
    NP_040921.2
    • genus-specific
    NP_040922.1
    • genus-common
    YP_002640218.1
    • genus-common

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001460.1 Reference assembly

      Range
      5771..16797
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_040920.1 penton base [Human mastadenovirus A]

      See identical proteins and their annotated locations for NP_040920.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P36716
      UniProtKB/TrEMBL
      A0A3G8W4Q9
      Conserved Domains (1) summary
      pfam01686
      Location:39 → 497
      Adeno_Penton_B; Adenovirus penton base protein

    2. YP_002640218.1 core protein precursor pVII [Human mastadenovirus A]

      See identical proteins and their annotated locations for YP_002640218.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3G8W3K2
      Conserved Domains (1) summary
      pfam03228
      Location:1 → 89
      Adeno_VII; Adenoviral core protein VII

    3. NP_040921.2 core protein V [Human mastadenovirus A]

      See identical proteins and their annotated locations for NP_040921.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P36717
      Conserved Domains (1) summary
      pfam03910
      Location:1 → 329
      Adeno_PV; Adenovirus minor core protein PV

    4. NP_040922.1 core protein precursor pX [Human mastadenovirus A]

      See identical proteins and their annotated locations for NP_040922.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P35986
      UniProtKB/TrEMBL
      A0A3G8W3D0, D3JIS8
      Conserved Domains (1) summary
      pfam05829
      Location:40 → 70
      Adeno_PX; Adenovirus late L2 mu core protein (Protein X)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    CAA51887.1
    CAA51888.1
    CAA51889.1

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