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    si:dkey-219c10.4 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Oncorhynchus gorbuscha (pink salmon) ]

    Gene ID: 124042938, updated on 22-Mar-2024

    Summary

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    Gene symbol
    si:dkey-219c10.4
    Gene description
    high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus gorbuscha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
    Orthologs
    zebrafish all
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    Genomic context

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    See si:dkey-219c10.4 in Genome Data Viewer
    Location:
    chromosome: LG09
    Exon count:
    14
    Annotation release Status Assembly LG Location
    100 current OgorEven_v1.0 (GCF_021184085.1) LG09 NC_060181.1 (68513431..68524407, complement)

    Linkage Group LG09 - NC_060181.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124043997 Neighboring gene translin-like Neighboring gene MKI67 FHA domain-interacting nucleolar phosphoprotein-like Neighboring gene small nucleolar RNA ACA64 Neighboring gene small nucleolar RNA ACA64

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_060181.1 Chromosome LG09 Reference OgorEven_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cGMP catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cGMP-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OgorEven_v1.0 Primary Assembly

    Genomic

    1. NC_060181.1 Reference OgorEven_v1.0 Primary Assembly

      Range
      68513431..68524407 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046361085.1 → XP_046217041.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Nucleotide Protein
    Heading Accession and Version

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