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    si:dkey-199f5.8 beta-1,4-galactosyltransferase 3 [ Oncorhynchus gorbuscha (pink salmon) ]

    Gene ID: 123997645, updated on 22-Mar-2024

    Summary

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    Gene symbol
    si:dkey-199f5.8
    Gene description
    beta-1,4-galactosyltransferase 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus gorbuscha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
    Orthologs
    zebrafish all
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    Genomic context

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    See si:dkey-199f5.8 in Genome Data Viewer
    Location:
    chromosome: LG15
    Exon count:
    7
    Annotation release Status Assembly LG Location
    100 current OgorEven_v1.0 (GCF_021184085.1) LG15 NC_060187.1 (61387521..61418170, complement)

    Linkage Group LG15 - NC_060187.1Genomic Context describing neighboring genes Neighboring gene aurora kinase-like Neighboring gene serine/threonine-protein kinase Nek8-like Neighboring gene 26S proteasome regulatory subunit 6B-like Neighboring gene sodium channel, voltage-gated, type I, beta a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_060187.1 Chromosome LG15 Reference OgorEven_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-1,4-galactosyltransferase 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OgorEven_v1.0 Primary Assembly

    Genomic

    1. NC_060187.1 Reference OgorEven_v1.0 Primary Assembly

      Range
      61387521..61418170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046302093.1 → XP_046158049.1  beta-1,4-galactosyltransferase 3

    2. XM_046302092.1 → XP_046158048.1  beta-1,4-galactosyltransferase 3

    Nucleotide Protein
    Heading Accession and Version

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