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    TECTA tectorin alpha [ Felis catus (domestic cat) ]

    Gene ID: 101099495, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TECTA
    Official Full Name
    tectorin alpha
    Primary source
    VGNC:VGNC:66061
    See related
    EnsemblRapid:ENSFCTG00005024366 EnsemblRapid:ENSFCTG00005024439
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
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    Genomic context

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    See TECTA in Genome Data Viewer
    Location:
    chromosome: D1
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D1 NC_058377.1 (18331251..18492696)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D1 NC_018732.3 (18397598..18465039)

    Chromosome D1 - NC_058377.1Genomic Context describing neighboring genes Neighboring gene TAR DNA-binding protein 43-like Neighboring gene uncharacterized LOC109491842 Neighboring gene uncharacterized LOC109491843 Neighboring gene uncharacterized LOC123380370 Neighboring gene sterol-C5-desaturase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-matrix adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-tectorin; tubulin-specific chaperone cofactor E-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058377.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      18331251..18492696
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023239201.2 → XP_023094969.2  alpha-tectorin isoform X2

      UniProtKB/TrEMBL
      M3WIY5
      Related
      ENSFCTP00005049701.1, ENSFCTT00005069569.1
      Conserved Domains (7) summary
      smart00216
      Location:632 → 796
      VWD; von Willebrand factor (vWF) type D domain
      smart00241
      Location:2119 → 2373
      ZP; Zona pellucida (ZP) domain
      smart00539
      Location:417 → 573
      NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
      smart00832
      Location:836 → 910
      C8; This domain contains 8 conserved cysteine residues
      COG4886
      Location:47 → 225
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:52 → 75
      LRR_RI; leucine-rich repeat [structural motif]
      cl17735
      Location:971 → 1025
      VWC; von Willebrand factor type C domain

    2. XM_023239199.2 → XP_023094967.1  tubulin-specific chaperone cofactor E-like protein isoform X1

      UniProtKB/TrEMBL
      M3WIY1
      Related
      ENSFCTP00005049622.1, ENSFCTT00005069425.1
      Conserved Domains (4) summary
      sd00033
      Location:52 → 75
      LRR_RI; leucine-rich repeat [structural motif]
      cd17045
      Location:337 → 422
      Ubl_TBCEL; ubiquitin-like (Ubl) domain found in tubulin-specific chaperone cofactor E-like protein (TBCEL) and similar proteins
      pfam14580
      Location:191 → 304
      LRR_9; Leucine-rich repeat
      cd21340
      Location:53 → 298
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    3. XM_023239200.2 → XP_023094968.1  tubulin-specific chaperone cofactor E-like protein isoform X1

      UniProtKB/TrEMBL
      M3WIY1
      Conserved Domains (4) summary
      sd00033
      Location:52 → 75
      LRR_RI; leucine-rich repeat [structural motif]
      cd17045
      Location:337 → 422
      Ubl_TBCEL; ubiquitin-like (Ubl) domain found in tubulin-specific chaperone cofactor E-like protein (TBCEL) and similar proteins
      pfam14580
      Location:191 → 304
      LRR_9; Leucine-rich repeat
      cd21340
      Location:53 → 298
      PPP1R42; protein phosphatase 1 regulatory subunit 42
    Nucleotide Protein
    Heading Accession and Version

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