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    GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 [ Mauremys mutica (yellowpond turtle) ]

    Gene ID: 123344368, updated on 22-Mar-2024

    Summary

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    Gene symbol
    GGA2
    Gene description
    golgi associated, gamma adaptin ear containing, ARF binding protein 2
    Locus tag
    KIL84_014859
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys mutica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current ASM2049712v1 (GCF_020497125.1) 11 NC_059082.1 (84613403..84637487)

    Chromosome 11 - NC_059082.1Genomic Context describing neighboring genes Neighboring gene ubiquitin family domain containing 1 Neighboring gene glutamyl-tRNA synthetase 2, mitochondrial Neighboring gene component of oligomeric golgi complex 7 Neighboring gene sodium channel epithelial 1 subunit beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_059082.1 Chromosome 11 Reference ASM2049712v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-binding protein GGA2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys mutica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2049712v1 Primary Assembly

    Genomic

    1. NC_059082.1 Reference ASM2049712v1 Primary Assembly

      Range
      84613403..84637487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044980514.1 → XP_044836449.1  ADP-ribosylation factor-binding protein GGA2 isoform X2

      Conserved Domains (3) summary
      smart00809
      Location:448 → 562
      Alpha_adaptinC2; Adaptin C-terminal domain
      cd17010
      Location:9 → 146
      VHS_GGA2; VHS (Vps27/Hrs/STAM) domain of ADP-ribosylation factor-binding protein GGA2
      cl03906
      Location:208 → 286
      GAT_SF; GAT domain found in eukaryotic GGAs, metazoan Tom1-like proteins, metazoan STAMs, fungal Vps27, and similar proteins

    2. XM_044980513.1 → XP_044836448.1  ADP-ribosylation factor-binding protein GGA2 isoform X1

      UniProtKB/TrEMBL
      A0A9D4B7L2
      Conserved Domains (3) summary
      smart00809
      Location:506 → 620
      Alpha_adaptinC2; Adaptin C-terminal domain
      cd17010
      Location:9 → 146
      VHS_GGA2; VHS (Vps27/Hrs/STAM) domain of ADP-ribosylation factor-binding protein GGA2
      cl03906
      Location:208 → 286
      GAT_SF; GAT domain found in eukaryotic GGAs, metazoan Tom1-like proteins, metazoan STAMs, fungal Vps27, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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