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    LOC123112413 ferritin-3, chloroplastic-like [ Triticum aestivum (bread wheat) ]

    Gene ID: 123112413, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC123112413
    Gene description
    ferritin-3, chloroplastic-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Triticum aestivum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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    Genomic context

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    See LOC123112413 in Genome Data Viewer
    Location:
    chromosome: 5B
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 5B NC_057807.1 (669393491..669396716, complement)

    Chromosome 5B - NC_057807.1Genomic Context describing neighboring genes Neighboring gene calmodulin-binding receptor-like cytoplasmic kinase 2 Neighboring gene protein NLP4-like Neighboring gene expansin-A7-like Neighboring gene protein NLP1-like Neighboring gene probable L-type lectin-domain containing receptor kinase S.5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057807.1 Chromosome 5B Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Optimizing de novo common wheat transcriptome assembly using short-read RNA-Seq data. Duan J, et al. BMC Genomics, 2012 Aug 14. PMID 22891638, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ferric iron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ferrous iron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular iron ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular sequestering of iron ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in iron ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ferritin-3, chloroplastic-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Genomic

    1. NC_057807.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

      Range
      669393491..669396716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044533393.1 → XP_044389328.1  ferritin-3, chloroplastic-like

      Conserved Domains (2) summary
      cl00264
      Location:84 → 166
      Ferritin_like; Ferritin-like superfamily of diiron-containing four-helix-bundle proteins
      cl17238
      Location:19 → 41
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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