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    LOC123357944 IgGFc-binding protein-like [ Mauremys mutica (yellowpond turtle) ]

    Gene ID: 123357944, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC123357944
    Gene description
    IgGFc-binding protein-like
    Locus tag
    KIL84_017899
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys mutica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
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    Genomic context

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    See LOC123357944 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    42
    Annotation release Status Assembly Chr Location
    100 current ASM2049712v1 (GCF_020497125.1) Unplaced Scaffold NW_025423148.1 (23955..50528)

    NW_025423148.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123357943 Neighboring gene C-type natriuretic peptide-like Neighboring gene ephrin type-B receptor 4-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025423148 Unplaced Scaffold Reference ASM2049712v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    IgGFc-binding protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys mutica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2049712v1 Primary Assembly

    Genomic

    1. NW_025423148.1 Reference ASM2049712v1 Primary Assembly

      Range
      23955..50528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045000815.1 → XP_044856750.1  IgGFc-binding protein-like

      Conserved Domains (6) summary
      PHA02682
      Location:235 → 307
      PHA02682; ORF080 virion core protein; Provisional
      smart00216
      Location:1135 → 1289
      VWD; von Willebrand factor (vWF) type D domain
      smart00832
      Location:947 → 1015
      C8; This domain contains 8 conserved cysteine residues
      cd00054
      Location:2312 → 2344
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam12714
      Location:1462 → 1517
      TILa; TILa domain
      cl17735
      Location:693 → 746
      VWC; von Willebrand factor type C domain
    Nucleotide Protein
    Heading Accession and Version

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