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    kirrel3b kirre like nephrin family adhesion molecule 3b [ Solea senegalensis (Senegalese sole) ]

    Gene ID: 122773387, updated on 22-Mar-2024

    Summary

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    Gene symbol
    kirrel3b
    Gene description
    kirre like nephrin family adhesion molecule 3b
    Locus tag
    JOB18_013130
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solea senegalensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
    Orthologs
    zebrafish all
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    Genomic context

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    See kirrel3b in Genome Data Viewer
    Location:
    chromosome: LG8
    Exon count:
    18
    Annotation release Status Assembly LG Location
    100 current IFAPA_SoseM_1 (GCF_019176455.1) LG8 NC_058028.1 (19210753..19359020, complement)

    Linkage Group LG8 - NC_058028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122773567 Neighboring gene uncharacterized LOC122773055 Neighboring gene somatolactin alpha Neighboring gene v-ets avian erythroblastosis virus E26 oncogene homolog 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058028.1 Chromosome LG8 Reference IFAPA_SoseM_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synapse assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kin of IRRE-like protein 3
    Names
    kin of IRRE 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IFAPA_SoseM_1 Primary Assembly

    Genomic

    1. NC_058028.1 Reference IFAPA_SoseM_1 Primary Assembly

      Range
      19210753..19359020 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044032042.1 → XP_043887977.1  kin of IRRE-like protein 3 isoform X10

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    2. XM_044032041.1 → XP_043887976.1  kin of IRRE-like protein 3 isoform X9

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    3. XM_044032040.1 → XP_043887975.1  kin of IRRE-like protein 3 isoform X8

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    4. XM_044032036.1 → XP_043887971.1  kin of IRRE-like protein 3 isoform X5

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    5. XM_044032035.1 → XP_043887970.1  kin of IRRE-like protein 3 isoform X4

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    6. XM_044032039.1 → XP_043887974.1  kin of IRRE-like protein 3 isoform X7

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    7. XM_044032038.1 → XP_043887973.1  kin of IRRE-like protein 3 isoform X6

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    8. XM_044032033.1 → XP_043887968.1  kin of IRRE-like protein 3 isoform X2

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    9. XM_044032034.1 → XP_043887969.1  kin of IRRE-like protein 3 isoform X3

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

    10. XM_044032032.1 → XP_043887967.1  kin of IRRE-like protein 3 isoform X1

      Conserved Domains (3) summary
      smart00408
      Location:133 → 203
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:311 → 386
      IG; Immunoglobulin
      cd05758
      Location:388 → 485
      IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    Nucleotide Protein
    Heading Accession and Version

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