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    LOC122663259 caffeoylshikimate esterase [ Telopea speciosissima ]

    Gene ID: 122663259, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC122663259
    Gene description
    caffeoylshikimate esterase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Telopea speciosissima
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Telopea
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    Genomic context

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    See LOC122663259 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Tspe_v1 (GCF_018873765.1) 1 NC_057916.1 (55806165..55807512)

    Chromosome 1 - NC_057916.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122663248 Neighboring gene bZIP transcription factor 11-like Neighboring gene helicase-like transcription factor CHR28 Neighboring gene uncharacterized LOC122651431

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057916.1 Chromosome 1 Reference Tspe_v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    caffeoylshikimate esterase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Telopea speciosissima Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tspe_v1

    Genomic

    1. NC_057916.1 Reference Tspe_v1

      Range
      55806165..55807512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043858948.1 → XP_043714883.1  caffeoylshikimate esterase

      Conserved Domains (1) summary
      cl21494
      Location:8 → 318
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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