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    LOC122647080 cytochrome c oxidase subunit 2-like [ Telopea speciosissima ]

    Gene ID: 122647080, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC122647080
    Gene description
    cytochrome c oxidase subunit 2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Telopea speciosissima
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Telopea
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    Genomic context

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    See LOC122647080 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Tspe_v1 (GCF_018873765.1) Unplaced Scaffold NW_025317348.1 (211827..216618)

    NW_025317348.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122647109 Neighboring gene uncharacterized LOC122647079 Neighboring gene ribosomal protein S7, mitochondrial Neighboring gene NADH-ubiquinone oxidoreductase chain 6-like Neighboring gene uncharacterized LOC122647104 Neighboring gene probable cytochrome c biosynthesis protein Neighboring gene probable cytochrome c biosynthesis protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025317348 Unplaced Scaffold Reference Tspe_v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cytochrome-c oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ATP synthesis coupled electron transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: cytochrome c oxidase subunit 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Telopea speciosissima Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tspe_v1

    Genomic

    1. NW_025317348.1 Reference Tspe_v1

      Range
      211827..216618
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043840595.1 → XP_043696530.1  LOW QUALITY PROTEIN: cytochrome c oxidase subunit 2-like

      Conserved Domains (1) summary
      MTH00023
      Location:55 → 291
      COX2; cytochrome c oxidase subunit II; Validated
    Nucleotide Protein
    Heading Accession and Version

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