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    alg9 ALG9 alpha-1,2-mannosyltransferase [ Chiloscyllium plagiosum (whitespotted bambooshark) ]

    Gene ID: 122540648, updated on 22-Mar-2024

    Summary

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    Gene symbol
    alg9
    Gene description
    ALG9 alpha-1,2-mannosyltransferase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chiloscyllium plagiosum
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae; Chiloscyllium
    Orthologs
    human zebrafish all
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    Genomic context

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    See alg9 in Genome Data Viewer
    Location:
    chromosome: 35
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current ASM401019v2 (GCF_004010195.1) 35 NC_057744.1 (10563336..10822212, complement)

    Chromosome 35 - NC_057744.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2, regulatory subunit A, beta a Neighboring gene uncharacterized LOC122540647 Neighboring gene ferredoxin-fold anticodon binding domain containing 1 Neighboring gene cilia and flagella associated protein 68 Neighboring gene crystallin, alpha B, b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057744.1 Chromosome 35 Reference ASM401019v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-1,2-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-1,2-mannosyltransferase ALG9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chiloscyllium plagiosum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM401019v2 Primary Assembly

    Genomic

    1. NC_057744.1 Reference ASM401019v2 Primary Assembly

      Range
      10563336..10822212 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043676654.1 → XP_043532589.1  alpha-1,2-mannosyltransferase ALG9 isoform X6

      Conserved Domains (1) summary
      pfam03901
      Location:23 → 445
      Glyco_transf_22; Alg9-like mannosyltransferase family

    2. XM_043676652.1 → XP_043532587.1  alpha-1,2-mannosyltransferase ALG9 isoform X4

      Conserved Domains (1) summary
      pfam03901
      Location:41 → 463
      Glyco_transf_22; Alg9-like mannosyltransferase family

    3. XM_043676649.1 → XP_043532584.1  alpha-1,2-mannosyltransferase ALG9 isoform X1

      Conserved Domains (1) summary
      pfam03901
      Location:85 → 507
      Glyco_transf_22; Alg9-like mannosyltransferase family

    4. XM_043676650.1 → XP_043532585.1  alpha-1,2-mannosyltransferase ALG9 isoform X2

      Conserved Domains (1) summary
      pfam03901
      Location:67 → 489
      Glyco_transf_22; Alg9-like mannosyltransferase family

    5. XM_043676651.1 → XP_043532586.1  alpha-1,2-mannosyltransferase ALG9 isoform X3

      Conserved Domains (1) summary
      pfam03901
      Location:46 → 468
      Glyco_transf_22; Alg9-like mannosyltransferase family

    6. XM_043676655.1 → XP_043532590.1  alpha-1,2-mannosyltransferase ALG9 isoform X7

      Conserved Domains (1) summary
      pfam03901
      Location:20 → 442
      Glyco_transf_22; Alg9-like mannosyltransferase family

    7. XM_043676653.1 → XP_043532588.1  alpha-1,2-mannosyltransferase ALG9 isoform X5

      Conserved Domains (1) summary
      pfam03901
      Location:38 → 460
      Glyco_transf_22; Alg9-like mannosyltransferase family
    Nucleotide Protein
    Heading Accession and Version

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