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    SH3RF2 SH3 domain containing ring finger 2 [ Cervus canadensis ]

    Gene ID: 122439756, updated on 22-Mar-2024

    Summary

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    Gene symbol
    SH3RF2
    Gene description
    SH3 domain containing ring finger 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cervus canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
    Orthologs
    human mouse all
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    Genomic context

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    See SH3RF2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current ASM1932006v1 (GCF_019320065.1) 4 NC_057389.1 (51623895..51768259, complement)

    Chromosome 4 - NC_057389.1Genomic Context describing neighboring genes Neighboring gene leucyl-tRNA synthetase 1 Neighboring gene PLAC8 like 1 Neighboring gene U6 spliceosomal RNA Neighboring gene glutaredoxin and cysteine rich domain containing 2 Neighboring gene PRELI domain containing 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057389.1 Chromosome 4 Reference ASM1932006v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein phosphatase 1 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of JNK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase SH3RF2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cervus canadensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1932006v1

    Genomic

    1. NC_057389.1 Reference ASM1932006v1

      Range
      51623895..51768259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043465109.1 → XP_043321044.1  E3 ubiquitin-protein ligase SH3RF2 isoform X1

      Conserved Domains (4) summary
      cd11784
      Location:387 → 441
      SH3_SH3RF2_3; Third Src Homology 3 domain of SH3 domain containing ring finger 2
      cd11929
      Location:128 → 181
      SH3_SH3RF2_1; First Src Homology 3 domain of SH3 domain containing ring finger 2
      cd11932
      Location:191 → 247
      SH3_SH3RF2_2; Second Src Homology 3 domain of SH3 domain containing ring finger 2
      cd16749
      Location:8 → 55
      RING-HC_SH3RF2; RING finger, HC subclass, found in SH3 domain-containing RING finger protein 2 (SH3RF2) and similar proteins

    2. XM_043465108.1 → XP_043321043.1  E3 ubiquitin-protein ligase SH3RF2 isoform X1

      Conserved Domains (4) summary
      cd11784
      Location:387 → 441
      SH3_SH3RF2_3; Third Src Homology 3 domain of SH3 domain containing ring finger 2
      cd11929
      Location:128 → 181
      SH3_SH3RF2_1; First Src Homology 3 domain of SH3 domain containing ring finger 2
      cd11932
      Location:191 → 247
      SH3_SH3RF2_2; Second Src Homology 3 domain of SH3 domain containing ring finger 2
      cd16749
      Location:8 → 55
      RING-HC_SH3RF2; RING finger, HC subclass, found in SH3 domain-containing RING finger protein 2 (SH3RF2) and similar proteins

    3. XM_043465110.1 → XP_043321045.1  E3 ubiquitin-protein ligase SH3RF2 isoform X2

      Conserved Domains (4) summary
      cd11784
      Location:387 → 441
      SH3_SH3RF2_3; Third Src Homology 3 domain of SH3 domain containing ring finger 2
      cd11929
      Location:128 → 181
      SH3_SH3RF2_1; First Src Homology 3 domain of SH3 domain containing ring finger 2
      cd11932
      Location:191 → 247
      SH3_SH3RF2_2; Second Src Homology 3 domain of SH3 domain containing ring finger 2
      cd16749
      Location:8 → 55
      RING-HC_SH3RF2; RING finger, HC subclass, found in SH3 domain-containing RING finger protein 2 (SH3RF2) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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