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    cog5 component of oligomeric golgi complex 5 [ Puntigrus tetrazona (Sumatra barb) ]

    Gene ID: 122342789, updated on 8-May-2024

    Summary

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    Gene symbol
    cog5
    Gene description
    component of oligomeric golgi complex 5
    See related
    EnsemblRapid:ENSPRZG00000015792
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Puntigrus tetrazona
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus
    Orthologs
    human zebrafish all
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    Genomic context

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    See cog5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current ASM1883169v1 (GCF_018831695.1) 4 NC_056702.1 (383479..449062, complement)

    Chromosome 4 - NC_056702.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 17 Neighboring gene cysteine and glycine-rich protein 2 Neighboring gene uncharacterized LOC122342795 Neighboring gene E2F transcription factor 7 Neighboring gene uncharacterized LOC122342794 Neighboring gene G protein-coupled receptor 22a Neighboring gene solute carrier organic anion transporter family, member 1C1 Neighboring gene phosphodiesterase 3A, cGMP-inhibited

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056702.1 Chromosome 4 Reference ASM1883169v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Golgi transport complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    conserved oligomeric Golgi complex subunit 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Puntigrus tetrazona Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1883169v1 Primary Assembly

    Genomic

    1. NC_056702.1 Reference ASM1883169v1 Primary Assembly

      Range
      383479..449062 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043236900.1 → XP_043092835.1  conserved oligomeric Golgi complex subunit 5 isoform X1

      Conserved Domains (1) summary
      pfam10392
      Location:57 → 179
      COG5; Golgi transport complex subunit 5

    2. XM_043236901.1 → XP_043092836.1  conserved oligomeric Golgi complex subunit 5 isoform X2

      Related
      ENSPRZP00000028661.1, ENSPRZT00000034753.1
      Conserved Domains (1) summary
      pfam10392
      Location:57 → 179
      COG5; Golgi transport complex subunit 5
    Nucleotide Protein
    Heading Accession and Version

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