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    LOC105907099 torsin-1A-interacting protein 2-like [ Clupea harengus (Atlantic herring) ]

    Gene ID: 105907099, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC105907099
    Gene description
    torsin-1A-interacting protein 2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Clupea harengus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
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    Genomic context

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    See LOC105907099 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current Ch_v2.0.2 (GCF_900700415.2) 10 NC_045161.1 (10288376..10306594)

    Chromosome 10 - NC_045161.1Genomic Context describing neighboring genes Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene proteasome 20S subunit alpha 8 Neighboring gene uncharacterized LOC116222160 Neighboring gene uncharacterized LOC116222162 Neighboring gene uncharacterized LOC122133212 Neighboring gene neoverrucotoxin subunit beta-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045161.1 Chromosome 10 Reference Ch_v2.0.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    torsin-1A-interacting protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ch_v2.0.2 Primary Assembly

    Genomic

    1. NC_045161.1 Reference Ch_v2.0.2 Primary Assembly

      Range
      10288376..10306594
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042708848.1 → XP_042564782.1  torsin-1A-interacting protein 2-like

      UniProtKB/TrEMBL
      A0A8M1KLN2
    Nucleotide Protein
    Heading Accession and Version

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