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    LOC122101746 photosystem II CP43 reaction center protein [ Dipodomys spectabilis (banner-tailed kangaroo rat) ]

    Gene ID: 122101746, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC122101746
    Gene description
    photosystem II CP43 reaction center protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys spectabilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
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    Genomic context

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    See LOC122101746 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current ASM1905484v1 (GCF_019054845.1) Unplaced Scaffold NW_024871357.1 (118525..120955, complement)

    NW_024871357.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene transfer RNA serine (anticodon UGA) Neighboring gene DNA-directed RNA polymerase subunit beta-like Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene transfer RNA aspartic acid (anticodon GUC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024871357 Unplaced Scaffold Reference ASM1905484v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chlorophyll binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in photosynthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in photosynthesis, light reaction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in photosynthetic electron transport in photosystem II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast thylakoid membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of photosystem II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    photosystem II CP43 reaction center protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys spectabilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1905484v1

    Genomic

    1. NW_024871357.1 Reference ASM1905484v1

      Range
      118525..120955 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042672211.1 → XP_042528145.1  photosystem II CP43 reaction center protein

      Conserved Domains (2) summary
      CHL00035
      Location:349 → 793
      psbC; photosystem II 44 kDa protein
      PLN00074
      Location:1 → 349
      PLN00074; photosystem II D2 protein (PsbD); Provisional
    Nucleotide Protein
    Heading Accession and Version

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