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    Sfrp1 secreted frizzled related protein 1 [ Dipodomys spectabilis (banner-tailed kangaroo rat) ]

    Gene ID: 122107657, updated on 22-Mar-2024

    Summary

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    Gene symbol
    Sfrp1
    Gene description
    secreted frizzled related protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys spectabilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Orthologs
    human mouse all
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    Genomic context

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    See Sfrp1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current ASM1905484v1 (GCF_019054845.1) Unplaced Scaffold NW_024870729.1 (2990569..3033297, complement)

    NW_024870729.1Genomic Context describing neighboring genes Neighboring gene elongation factor G, mitochondrial-like Neighboring gene zinc finger matrin-type 4 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene ADP-ribosylation factor 1-like Neighboring gene golgin A7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024870729 Unplaced Scaffold Reference ASM1905484v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Wnt-protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in non-canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    secreted frizzled-related protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys spectabilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1905484v1

    Genomic

    1. NW_024870729.1 Reference ASM1905484v1

      Range
      2990569..3033297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042679459.1 → XP_042535393.1  secreted frizzled-related protein 1

      Conserved Domains (2) summary
      cd07443
      Location:52 → 175
      CRD_SFRP1; Cysteine-rich domain of the secreted frizzled-related protein 1 (SFRP1), a regulator of Wnt activity
      cd03580
      Location:185 → 306
      NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
    Nucleotide Protein
    Heading Accession and Version

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