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    slc6a4a solute carrier family 6 member 4a [ Cheilinus undulatus (humphead wrasse) ]

    Gene ID: 121525276, updated on 12-Sep-2024

    Summary

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    Gene symbol
    slc6a4a
    Gene description
    solute carrier family 6 member 4a
    See related
    EnsemblRapid:ENSCUDG00000000528
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cheilinus undulatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Cheilinus
    Orthologs
    zebrafish all
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    Genomic context

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    See slc6a4a in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly LG Location
    100 current ASM1832078v1 (GCF_018320785.1) 2 NC_054866.1 (9808708..9865961)

    Linkage Group 2 - NC_054866.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121518170 Neighboring gene bleomycin hydrolase Neighboring gene putative nuclease HARBI1 Neighboring gene apolipoprotein A-I-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054866.1 Chromosome 2 Reference ASM1832078v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serotonin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serotonin:sodium:chloride symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in serotonin uptake IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 6 member 4a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cheilinus undulatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1832078v1 Primary Assembly

    Genomic

    1. NC_054866.1 Reference ASM1832078v1 Primary Assembly

      Range
      9808708..9865961
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041811173.1 → XP_041667107.1  solute carrier family 6 member 4a

      Conserved Domains (1) summary
      cl00456
      Location:115 → 652
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_041811180.1 → XP_041667114.1  solute carrier family 6 member 4a

      Related
      ENSCUDP00000001034.1, ENSCUDT00000001147.1
      Conserved Domains (1) summary
      cl00456
      Location:115 → 652
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version

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