U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    KIRREL3 kirre like nephrin family adhesion molecule 3 [ Vulpes lagopus (Arctic fox) ]

    Gene ID: 121500802, updated on 22-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    KIRREL3
    Gene description
    kirre like nephrin family adhesion molecule 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vulpes lagopus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See KIRREL3 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current ASM1834538v1 (GCF_018345385.1) 10 NC_054833.1 (33788279..34329223)

    Chromosome 10 - NC_054833.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC121500860 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene decapping enzyme, scavenger

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_054833.1 Chromosome 10 Reference ASM1834538v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synapse assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    kin of IRRE-like protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1834538v1 Primary Assembly

    Genomic

    1. NC_054833.1 Reference ASM1834538v1 Primary Assembly

      Range
      33788279..34329223
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041772894.1 → XP_041628828.1  kin of IRRE-like protein 3 isoform X1

      Conserved Domains (4) summary
      cd00096
      Location:343 → 347
      Ig; Ig strand A' [structural motif]
      cd05759
      Location:149 → 246
      IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
      cd05898
      Location:418 → 515
      IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
      cl11960
      Location:335 → 416
      Ig; Immunoglobulin domain

    2. XM_041772895.1 → XP_041628829.1  kin of IRRE-like protein 3 isoform X2

      Conserved Domains (4) summary
      cd00096
      Location:343 → 347
      Ig; Ig strand A' [structural motif]
      cd05759
      Location:149 → 246
      IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
      cd05898
      Location:418 → 515
      IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
      cl11960
      Location:335 → 416
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.