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    Epha1 EPH receptor A1 [ Microtus oregoni (creeping vole) ]

    Gene ID: 121435402, updated on 11-Apr-2024

    Summary

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    Gene symbol
    Epha1
    Gene description
    EPH receptor A1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microtus oregoni
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
    Orthologs
    human mouse all
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    Genomic context

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    See Epha1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current Mior012 (GCF_018167655.1) Unplaced Scaffold NW_024543220.1 (3915799..3932527, complement)

    NW_024543220.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 131 member B Neighboring gene zyxin Neighboring gene U6 spliceosomal RNA Neighboring gene taste receptor type 2 member 143-like Neighboring gene taste 2 receptor member 60

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024543220 Unplaced Scaffold Reference Mior012

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane-ephrin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ephrin type-A receptor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microtus oregoni Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mior012

    Genomic

    1. NW_024543220.1 Reference Mior012

      Range
      3915799..3932527 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041634695.1 → XP_041490629.1  ephrin type-A receptor 1

      Conserved Domains (5) summary
      cd09542
      Location:912 → 974
      SAM_EPH-A1; SAM domain of EPH-A1 subfamily of tyrosine kinase receptors
      cd10479
      Location:27 → 203
      EphR_LBD_A1; Ligand Binding Domain of Ephrin type-A Receptor 1
      cd12841
      Location:536 → 568
      TM_EphA1; Transmembrane domain of Ephrin Receptor A1 Protein Tyrosine Kinase
      cd00063
      Location:453 → 535
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cl21453
      Location:619 → 884
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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