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    LOC121420630 zonadhesin-like [ Lytechinus variegatus (green sea urchin) ]

    Gene ID: 121420630, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC121420630
    Gene description
    zonadhesin-like
    See related
    EnsemblRapid:LOC121420630
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lytechinus variegatus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Temnopleuroida; Toxopneustidae; Lytechinus
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    Genomic context

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    See LOC121420630 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current Lvar_3.0 (GCF_018143015.1) 8 NC_054747.1 (9733161..9778687, complement)

    Chromosome 8 - NC_054747.1Genomic Context describing neighboring genes Neighboring gene UDP-glucuronosyltransferase 2C1-like Neighboring gene serine/arginine repetitive matrix protein 2-like Neighboring gene 39S ribosomal protein L41, mitochondrial-like Neighboring gene serine/threonine-protein kinase SIK2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054747.1 Chromosome 8 Reference Lvar_3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zonadhesin-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lytechinus variegatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Lvar_3.0 Primary Assembly

    Genomic

    1. NC_054747.1 Reference Lvar_3.0 Primary Assembly

      Range
      9733161..9778687 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041615294.1 → XP_041471228.1  zonadhesin-like

      Related
      XP_041471228.1, XM_041615294.1
      Conserved Domains (4) summary
      smart00216
      Location:397 → 555
      VWD; von Willebrand factor (vWF) type D domain
      smart00832
      Location:996 → 1057
      C8; This domain contains 8 conserved cysteine residues
      pfam12714
      Location:731 → 785
      TILa; TILa domain
      cl00049
      Location:43 → 139
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    Nucleotide Protein
    Heading Accession and Version

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