U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC107951782 disease resistance protein RPS2 [ Gossypium hirsutum (cotton) ]

    Gene ID: 107951782, updated on 12-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC107951782
    Gene description
    disease resistance protein RPS2
    Locus tag
    ERO13_D01G058200v2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gossypium hirsutum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC107951782 in Genome Data Viewer
    Location:
    chromosome: D01
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D01 NC_053437.1 (8590415..8596088)

    Chromosome D01 - NC_053437.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121213814 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 Neighboring gene uncharacterized LOC121213542 Neighboring gene probable NAD(P)H dehydrogenase (quinone) FQR1-like 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_053437.1 Chromosome D01 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    disease resistance protein RPS2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Genomic

    1. NC_053437.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

      Range
      8590415..8596088
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016886916.2 → XP_016742405.2  disease resistance protein RPS2

      UniProtKB/TrEMBL
      A0A1U8NTW4
      Conserved Domains (3) summary
      PLN03210
      Location:43 → 425
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00031
      Location:541 → 563
      LRR_1; leucine-rich repeat [structural motif]
      NF033189
      Location:492 → 654
      internalin_A; class 1 internalin InlA

    2. XM_016886918.2 → XP_016742407.2  disease resistance protein RPS2

      UniProtKB/TrEMBL
      A0A1U8NTW4
      Conserved Domains (3) summary
      PLN03210
      Location:43 → 425
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00031
      Location:541 → 563
      LRR_1; leucine-rich repeat [structural motif]
      NF033189
      Location:492 → 654
      internalin_A; class 1 internalin InlA
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases