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    CPO carboxypeptidase O [ Rana temporaria (common frog) ]

    Gene ID: 120943772, updated on 21-Mar-2024

    Summary

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    Gene symbol
    CPO
    Gene description
    carboxypeptidase O
    See related
    EnsemblRapid:ENSRTEG00010011206
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rana temporaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
    Orthologs
    human mouse all
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    Genomic context

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    See CPO in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current aRanTem1.1 (GCF_905171775.1) 6 NC_053494.1 (124395079..124670701, complement)

    Chromosome 6 - NC_053494.1Genomic Context describing neighboring genes Neighboring gene malate dehydrogenase 1B Neighboring gene FAST kinase domains 2 Neighboring gene KLF transcription factor 7 Neighboring gene 1-phosphatidylinositol 3-phosphate 5-kinase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053494.1 Chromosome 6 Reference aRanTem1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metallocarboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carboxypeptidase O

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aRanTem1.1

    Genomic

    1. NC_053494.1 Reference aRanTem1.1

      Range
      124395079..124670701 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040357316.1 → XP_040213250.1  carboxypeptidase O isoform X2

      Related
      ENSRTEP00010014240.1, ENSRTET00010019026.1
      Conserved Domains (1) summary
      cl11393
      Location:123 → 420
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    2. XM_040357317.1 → XP_040213251.1  carboxypeptidase O isoform X2

      Conserved Domains (1) summary
      cl11393
      Location:123 → 420
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    3. XM_040357315.1 → XP_040213249.1  carboxypeptidase O isoform X1

      Conserved Domains (1) summary
      cl11393
      Location:159 → 456
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins
    Nucleotide Protein
    Heading Accession and Version

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