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    LOC120802899 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase-like [ Xiphias gladius (swordfish) ]

    Gene ID: 120802899, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120802899
    Gene description
    lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xiphias gladius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
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    Genomic context

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    See LOC120802899 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM1685928v1 (GCF_016859285.1) 17 NC_053416.1 (18923711..18930651)

    Chromosome 17 - NC_053416.1Genomic Context describing neighboring genes Neighboring gene oligophrenin-1-like Neighboring gene androgen receptor-like Neighboring gene moesin a Neighboring gene zinc finger CCCH-type containing 12B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053416.1 Chromosome 17 Reference ASM1685928v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hexosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1685928v1 Primary Assembly

    Genomic

    1. NC_053416.1 Reference ASM1685928v1 Primary Assembly

      Range
      18923711..18930651
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040151082.1 → XP_040007016.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase-like

      Conserved Domains (1) summary
      cl21608
      Location:123 → 202
      Galactosyl_T; Galactosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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