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    ANKFY1 ankyrin repeat and FYVE domain containing 1 [ Crotalus tigris (Tiger rattlesnake) ]

    Gene ID: 120303983, updated on 21-Mar-2024

    Summary

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    Gene symbol
    ANKFY1
    Gene description
    ankyrin repeat and FYVE domain containing 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Crotalus tigris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
    Orthologs
    human mouse all
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    Genomic context

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    See ANKFY1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024100687.1 (173960..247035)

    NW_024100687.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120303971 Neighboring gene ubiquitin conjugating enzyme E2 G1 Neighboring gene neuferricin Neighboring gene uncharacterized LOC120303986 Neighboring gene putative methyltransferase DDB_G0268948 Neighboring gene RAS p21 protein activator 4B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024100687 Unplaced Scaffold Reference ASM1654583v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rabankyrin-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1654583v1

    Genomic

    1. NW_024100687.1 Reference ASM1654583v1

      Range
      173960..247035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039334002.1 → XP_039189936.1  rabankyrin-5 isoform X1

      Conserved Domains (7) summary
      PHA03095
      Location:696 → 992
      PHA03095; ankyrin-like protein; Provisional
      cd15728
      Location:1100 → 1162
      FYVE_ANFY1; FYVE domain found in ankyrin repeat and FYVE domain-containing protein 1 (ANFY1) and similar proteins
      sd00045
      Location:874 → 902
      ANK; ANK repeat [structural motif]
      cd18303
      Location:50 → 169
      BTB_POZ_Rank-5; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in rabankyrin-5 (Rank-5)
      cd18501
      Location:162 → 250
      BACK_ANKFY1_Rank5; BACK (BTB and C-terminal Kelch) domain found in rabankyrin-5 (Rank-5)
      pfam12796
      Location:625 → 712
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:274 → 568
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_039334003.1 → XP_039189937.1  rabankyrin-5 isoform X2

      Conserved Domains (7) summary
      PHA03095
      Location:695 → 991
      PHA03095; ankyrin-like protein; Provisional
      cd15728
      Location:1099 → 1161
      FYVE_ANFY1; FYVE domain found in ankyrin repeat and FYVE domain-containing protein 1 (ANFY1) and similar proteins
      sd00045
      Location:873 → 901
      ANK; ANK repeat [structural motif]
      cd18303
      Location:49 → 168
      BTB_POZ_Rank-5; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in rabankyrin-5 (Rank-5)
      cd18501
      Location:161 → 249
      BACK_ANKFY1_Rank5; BACK (BTB and C-terminal Kelch) domain found in rabankyrin-5 (Rank-5)
      pfam12796
      Location:624 → 711
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:273 → 567
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_039334004.1 → XP_039189938.1  rabankyrin-5 isoform X3

      Conserved Domains (7) summary
      PHA03095
      Location:612 → 908
      PHA03095; ankyrin-like protein; Provisional
      cd15728
      Location:1016 → 1078
      FYVE_ANFY1; FYVE domain found in ankyrin repeat and FYVE domain-containing protein 1 (ANFY1) and similar proteins
      sd00045
      Location:790 → 818
      ANK; ANK repeat [structural motif]
      cd18501
      Location:78 → 166
      BACK_ANKFY1_Rank5; BACK (BTB and C-terminal Kelch) domain found in rabankyrin-5 (Rank-5)
      cl38908
      Location:24 → 85
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
      pfam12796
      Location:541 → 628
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:190 → 484
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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