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    ACTA1 actin alpha 1, skeletal muscle [ Crotalus tigris (Tiger rattlesnake) ]

    Gene ID: 120303392, updated on 21-Mar-2024

    Summary

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    Gene symbol
    ACTA1
    Gene description
    actin alpha 1, skeletal muscle
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Crotalus tigris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
    Orthologs
    human mouse all
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    Genomic context

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    See ACTA1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024100638.1 (161412..167893)

    NW_024100638.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily B member 10 Neighboring gene uncharacterized LOC120303387 Neighboring gene nucleoporin 133 Neighboring gene centriole, cilia and spindle associated protein Neighboring gene RAB4A, member RAS oncogene family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024100638 Unplaced Scaffold Reference ASM1654583v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in skeletal muscle thin filament assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in striated muscle thin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin, alpha skeletal muscle

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1654583v1

    Genomic

    1. NW_024100638.1 Reference ASM1654583v1

      Range
      161412..167893
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039332876.1 → XP_039188810.1  actin, alpha skeletal muscle

      Conserved Domains (1) summary
      PTZ00281
      Location:4 → 377
      PTZ00281; actin; Provisional
    Nucleotide Protein
    Heading Accession and Version

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