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    LOC120077481 probable protein phosphatase 2C 58 [ Benincasa hispida (wax gourd) ]

    Gene ID: 120077481, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120077481
    Gene description
    probable protein phosphatase 2C 58
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Benincasa hispida
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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    Genomic context

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    See LOC120077481 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current ASM972705v1 (GCF_009727055.1) 5 NC_052353.1 (60540972..60544205, complement)

    Chromosome 5 - NC_052353.1Genomic Context describing neighboring genes Neighboring gene phospholipid-transporting ATPase 2 Neighboring gene zinc finger CCCH domain-containing protein 2-like Neighboring gene protein TPX2-like Neighboring gene squamosa promoter-binding protein 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052353.1 Chromosome 5 Reference ASM972705v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable protein phosphatase 2C 58

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM972705v1

    Genomic

    1. NC_052353.1 Reference ASM972705v1

      Range
      60540972..60544205 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039031363.1 → XP_038887291.1  probable protein phosphatase 2C 58

      Conserved Domains (1) summary
      cd00143
      Location:38 → 286
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
    Nucleotide Protein
    Heading Accession and Version

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