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    LOC120076531 pectate lyase-like [ Benincasa hispida (wax gourd) ]

    Gene ID: 120076531, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120076531
    Gene description
    pectate lyase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Benincasa hispida
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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    Genomic context

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    See LOC120076531 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM972705v1 (GCF_009727055.1) 4 NC_052352.1 (30098174..30100135)

    Chromosome 4 - NC_052352.1Genomic Context describing neighboring genes Neighboring gene probable serine/threonine-protein kinase PIX13 Neighboring gene catalase isozyme 3 Neighboring gene uncharacterized LOC120075261 Neighboring gene transfer RNA leucine (anticodon AAG)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052352.1 Chromosome 4 Reference ASM972705v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pectate lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pectate lyase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM972705v1

    Genomic

    1. NC_052352.1 Reference ASM972705v1

      Range
      30098174..30100135
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039030387.1 → XP_038886315.1  pectate lyase-like

      Conserved Domains (2) summary
      smart00656
      Location:157 → 351
      Amb_all; Amb_all domain
      pfam04431
      Location:25 → 72
      Pec_lyase_N; Pectate lyase, N-terminus
    Nucleotide Protein
    Heading Accession and Version

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