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    LOC120091508 AAA-ATPase At3g28580-like [ Benincasa hispida (wax gourd) ]

    Gene ID: 120091508, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120091508
    Gene description
    AAA-ATPase At3g28580-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Benincasa hispida
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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    Genomic context

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    See LOC120091508 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current ASM972705v1 (GCF_009727055.1) 11 NC_052359.1 (82717397..82719374)

    Chromosome 11 - NC_052359.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120090905 Neighboring gene AAA-ATPase ASD, mitochondrial-like Neighboring gene small nucleolar RNA R64/Z200 family Neighboring gene small nucleolar RNA U54

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052359.1 Chromosome 11 Reference ASM972705v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AAA-ATPase At3g28580-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM972705v1

    Genomic

    1. NC_052359.1 Reference ASM972705v1

      Range
      82717397..82719374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039049576.1 → XP_038905504.1  AAA-ATPase At3g28580-like

      Conserved Domains (2) summary
      pfam14363
      Location:31 → 126
      AAA_assoc; Domain associated at C-terminal with AAA
      cd19510
      Location:221 → 391
      RecA-like_BCS1; Mitochondrial chaperone BCS1
    Nucleotide Protein
    Heading Accession and Version

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