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    LOC120088051 ABC transporter F family member 1 [ Benincasa hispida (wax gourd) ]

    Gene ID: 120088051, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120088051
    Gene description
    ABC transporter F family member 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Benincasa hispida
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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    Genomic context

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    See LOC120088051 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current ASM972705v1 (GCF_009727055.1) 10 NC_052358.1 (3373162..3376740)

    Chromosome 10 - NC_052358.1Genomic Context describing neighboring genes Neighboring gene heavy metal-associated isoprenylated plant protein 3-like Neighboring gene uncharacterized LOC120088052 Neighboring gene auxin-responsive protein SAUR50-like Neighboring gene UDP-glycosyltransferase 86A2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052358.1 Chromosome 10 Reference ASM972705v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ABC transporter F family member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM972705v1

    Genomic

    1. NC_052358.1 Reference ASM972705v1

      Range
      3373162..3376740
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039045078.1 → XP_038901006.1  ABC transporter F family member 1

      Conserved Domains (1) summary
      COG0488
      Location:70 → 589
      Uup; ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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