U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Atf3 Activating transcription factor 3 [ Drosophila sechellia ]

    Gene ID: 6615961, updated on 24-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Atf3
    Gene description
    Activating transcription factor 3
    Locus tag
    Dsec_GM18988
    See related
    EnsemblRapid:LOC6615961
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM18988; GM18988-PA
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Atf3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) X NC_045954.1 (1193258..1225516, complement)

    Chromosome X - NC_045954.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6615959 Neighboring gene ATP-dependent DNA helicase DDX11 Neighboring gene calcineurin B homologous protein 2 Neighboring gene uncharacterized LOC116802027 Neighboring gene disheveled-associated activator of morphogenesis-like protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_045954.1 Chromosome X Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    activating transcription factor 3
    Names
    Dsec\GM18988
    Dsec\GM18988-PA
    dsec_GLEANR_20593

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045954.1 Reference ASM438219v1

      Range
      1193258..1225516 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002040292.2 → XP_002040328.1  activating transcription factor 3

      See identical proteins and their annotated locations for XP_002040328.1

      UniProtKB/TrEMBL
      B4I9B8
      Related
      XP_002040328.1, XM_002040292.2
      Conserved Domains (1) summary
      cd14722
      Location:215 → 268
      bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.