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    CLEC12B C-type lectin domain family 12 member B [ Canis lupus familiaris (dog) ]

    Gene ID: 611402, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLEC12Bprovided by VGNC
    Official Full Name
    C-type lectin domain family 12 member Bprovided by VGNC
    Primary source
    VGNC:VGNC:39326
    See related
    Ensembl:ENSCAFG00845027467
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CLEC12B in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (36285169..36307769)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (10662221..10684568, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (10184037..10206287, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (36195974..36218366)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain containing 7A Neighboring gene C-type lectin domain family 1 member A Neighboring gene C-type lectin domain family 1 member B Neighboring gene uncharacterized LOC106557878 Neighboring gene C-type lectin domain family 12 member A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in natural killer cell inhibitory signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-type lectin domain family 12 member B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      36285169..36307769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038439029.1 → XP_038294957.1  C-type lectin domain family 12 member B isoform X2

      UniProtKB/TrEMBL
      A0A8C0K0C5
      Conserved Domains (1) summary
      cd03593
      Location:125 → 247
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    2. XM_038439030.1 → XP_038294958.1  C-type lectin domain family 12 member B isoform X3

      UniProtKB/TrEMBL
      A0A8C0K0C5, A0A8C0PBP0
      Conserved Domains (1) summary
      cd03593
      Location:144 → 237
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    3. XM_038439028.1 → XP_038294956.1  C-type lectin domain family 12 member B isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0C5, A0A8C0PBP0, A0A8I3SAU5, A0A8P0SI29
      Related
      ENSCAFP00845037982.1, ENSCAFT00845048414.1
      Conserved Domains (1) summary
      cd03593
      Location:144 → 266
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      36195974..36218366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038641511.1 → XP_038497439.1  C-type lectin domain family 12 member B isoform X2

    2. XM_038641512.1 → XP_038497440.1  C-type lectin domain family 12 member B isoform X3

      Conserved Domains (1) summary
      cd03593
      Location:144 → 237
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    3. XM_038641510.1 → XP_038497438.1  C-type lectin domain family 12 member B isoform X1

      Conserved Domains (1) summary
      cd03593
      Location:144 → 266
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      10184037..10206287 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038576769.1 → XP_038432697.1  C-type lectin domain family 12 member B isoform X2

      UniProtKB/TrEMBL
      A0A8C0PBP0

    2. XM_038576770.1 → XP_038432698.1  C-type lectin domain family 12 member B isoform X3

      UniProtKB/TrEMBL
      A0A8C0PBP0

    3. XM_038576768.1 → XP_038432696.1  C-type lectin domain family 12 member B isoform X1

      UniProtKB/TrEMBL
      A0A8C0PBP0

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      10662221..10684568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038459809.1 → XP_038315737.1  C-type lectin domain family 12 member B isoform X2

      UniProtKB/TrEMBL
      A0A8C0K0C5
      Conserved Domains (1) summary
      cd03593
      Location:125 → 247
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    2. XM_022411026.2 → XP_022266734.1  C-type lectin domain family 12 member B isoform X3

      UniProtKB/TrEMBL
      A0A8C0K0C5, A0A8C0PBP0
      Conserved Domains (1) summary
      cd03593
      Location:144 → 237
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    3. XM_849067.5 → XP_854160.3  C-type lectin domain family 12 member B isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0C5, A0A8C0PBP0, A0A8I3SAU5, A0A8P0SI29
      Conserved Domains (1) summary
      cd03593
      Location:144 → 266
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    Nucleotide Protein
    Heading Accession and Version

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