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    ARPC2 actin related protein 2/3 complex subunit 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 478907, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARPC2provided by VGNC
    Official Full Name
    actin related protein 2/3 complex subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:111346
    See related
    Ensembl:ENSCAFG00845026524
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ARPC2 in Genome Data Viewer
    Location:
    chromosome: 37
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (24922615..24952042)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (25726741..25756145)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (24781773..24811231)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (24827991..24857388)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (24762177..24791643)

    Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene C-X-C motif chemokine receptor 2 Neighboring gene chemokine (C-X-C motif) receptor 1 Neighboring gene G protein-coupled bile acid receptor 1 Neighboring gene angio associated migratory cell protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Arp2/3 protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin-related protein 2/3 complex subunit 2; LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051841.1 Reference ROS_Cfam_1.0

      Range
      24922615..24952042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038447922.1 → XP_038303850.1  actin-related protein 2/3 complex subunit 2

      UniProtKB/TrEMBL
      A0A8C0LSC2, A0A8C0PCG9, A0A8C0THE8, A0A8I3PPQ5, A0A8I3PPW3
      Related
      ENSCAFP00845036754.1, ENSCAFT00845046863.1
      Conserved Domains (1) summary
      pfam04045
      Location:57 → 284
      P34-Arc; Arp2/3 complex, 34 kD subunit p34-Arc

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049297.1 Alternate UMICH_Zoey_3.1

      Range
      24827991..24857388
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038521917.1 → XP_038377845.1  actin-related protein 2/3 complex subunit 2

      Conserved Domains (1) summary
      pfam04045
      Location:57 → 284
      P34-Arc; Arp2/3 complex, 34 kD subunit p34-Arc

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

      Range
      24762177..24791643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038650094.1 → XP_038506022.1  actin-related protein 2/3 complex subunit 2

      Conserved Domains (1) summary
      pfam04045
      Location:57 → 284
      P34-Arc; Arp2/3 complex, 34 kD subunit p34-Arc

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

      Range
      24781773..24811231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038585714.1 → XP_038441642.1  LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 2

      UniProtKB/TrEMBL
      A0A8C0LSC2, A0A8C0PCG9, A0A8C0THE8, A0A8I3PPQ5, A0A8I3PPW3
      Conserved Domains (1) summary
      pfam04045
      Location:57 → 284
      P34-Arc; Arp2/3 complex, 34 kD subunit p34-Arc

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      25726741..25756145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038463633.1 → XP_038319561.1  actin-related protein 2/3 complex subunit 2

      UniProtKB/TrEMBL
      A0A8C0LSC2, A0A8C0PCG9, A0A8C0THE8, A0A8I3PPQ5, A0A8I3PPW3
      Conserved Domains (1) summary
      pfam04045
      Location:57 → 284
      P34-Arc; Arp2/3 complex, 34 kD subunit p34-Arc
    Nucleotide Protein
    Heading Accession and Version

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