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    lipeb lipase, hormone-sensitive b [ Micropterus salmoides (largemouth bass) ]

    Gene ID: 119897337, updated on 18-Sep-2024

    Summary

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    Gene symbol
    lipeb
    Gene description
    lipase, hormone-sensitive b
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Micropterus salmoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus
    Orthologs
    human zebrafish all
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    Genomic context

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    See lipeb in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current ASM1485139v1 (GCF_014851395.1) Unplaced Scaffold NW_024040152.1 (12729796..12759482, complement)

    NW_024040152.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L17 Neighboring gene transmembrane protein 145 Neighboring gene CD79a molecule, immunoglobulin-associated alpha Neighboring gene Rho guanine nucleotide exchange factor (GEF) 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024040152 Unplaced Scaffold Reference ASM1485139v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sterol ester esterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables triacylglycerol lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cholesterol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in triglyceride catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hormone-sensitive lipase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Micropterus salmoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1485139v1 Primary Assembly

    Genomic

    1. NW_024040152.1 Reference ASM1485139v1 Primary Assembly

      Range
      12729796..12759482 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038710962.1 → XP_038566890.1  hormone-sensitive lipase isoform X1

      Conserved Domains (2) summary
      pfam06350
      Location:37 → 348
      HSL_N; Hormone-sensitive lipase (HSL) N-terminus
      cl21494
      Location:381 → 526
      Abhydrolase; alpha/beta hydrolases

    2. XM_038710964.1 → XP_038566892.1  hormone-sensitive lipase isoform X3

      Conserved Domains (2) summary
      pfam06350
      Location:22 → 333
      HSL_N; Hormone-sensitive lipase (HSL) N-terminus
      cl21494
      Location:366 → 511
      Abhydrolase; alpha/beta hydrolases

    3. XM_038710963.1 → XP_038566891.1  hormone-sensitive lipase isoform X2

      Conserved Domains (2) summary
      pfam06350
      Location:36 → 347
      HSL_N; Hormone-sensitive lipase (HSL) N-terminus
      cl21494
      Location:380 → 525
      Abhydrolase; alpha/beta hydrolases

    4. XM_038710965.1 → XP_038566893.1  hormone-sensitive lipase isoform X4

      Conserved Domains (2) summary
      pfam06350
      Location:6 → 317
      HSL_N; Hormone-sensitive lipase (HSL) N-terminus
      cl21494
      Location:350 → 495
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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