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    Cd320 CD320 molecule [ Arvicola amphibius (Eurasian water vole) ]

    Gene ID: 119815486, updated on 21-Mar-2024

    Summary

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    Gene symbol
    Cd320
    Gene description
    CD320 molecule
    See related
    EnsemblRapid:ENSAAPG00005004752
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arvicola amphibius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
    Orthologs
    human mouse all
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    Genomic context

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    See Cd320 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current mArvAmp1.2 (GCF_903992535.2) 1 NC_052047.1 (101338000..101342444, complement)
    100 previous assembly mArvAmp1.1 (GCF_903992535.1) 1 NC_052047.1 (101338000..101342444, complement)

    Chromosome 1 - NC_052047.1Genomic Context describing neighboring genes Neighboring gene actin-related protein 2/3 complex subunit 2-like Neighboring gene actin-related protein 2/3 complex subunit 2-like Neighboring gene 60S ribosomal protein L7a-like Neighboring gene NADH:ubiquinone oxidoreductase subunit A7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cholesterol homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor-mediated endocytosis involved in cholesterol transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CD320 antigen

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mArvAmp1.2

    Genomic

    1. NC_052047.1 Reference mArvAmp1.2

      Range
      101338000..101342444 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038331627.1 → XP_038187555.1  CD320 antigen

      Related
      ENSAAPP00005006139.1, ENSAAPT00005006720.2
      Conserved Domains (1) summary
      cd00112
      Location:47 → 82
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    Nucleotide Protein
    Heading Accession and Version

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