U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PTPRU protein tyrosine phosphatase receptor type U [ Falco rusticolus (gyrfalcon) ]

    Gene ID: 119144951, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PTPRU
    Gene description
    protein tyrosine phosphatase receptor type U
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Falco rusticolus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PTPRU in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    100 current bFalRus1.pri (GCF_015220075.1) 3 NC_051189.1 (113668080..113738836, complement)

    Chromosome 3 - NC_051189.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119144023 Neighboring gene uncharacterized LOC119144026 Neighboring gene uncharacterized LOC119145553 Neighboring gene mitochondrial trans-2-enoyl-CoA reductase Neighboring gene serine and arginine rich splicing factor 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_051189.1 Chromosome 3 Reference bFalRus1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    receptor-type tyrosine-protein phosphatase U

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Falco rusticolus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bFalRus1.pri Primary Assembly

    Genomic

    1. NC_051189.1 Reference bFalRus1.pri Primary Assembly

      Range
      113668080..113738836 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037380925.1 → XP_037236822.1  receptor-type tyrosine-protein phosphatase U isoform X3

      Conserved Domains (7) summary
      smart00137
      Location:22 → 185
      MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
      smart00409
      Location:195 → 281
      IG; Immunoglobulin
      cd00063
      Location:385 → 480
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14632
      Location:931 → 1141
      R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
      cd14637
      Location:1226 → 1432
      R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
      pfam00041
      Location:493 → 576
      fn3; Fibronectin type III domain
      pfam18861
      Location:620 → 771
      PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J

    2. XM_037380923.1 → XP_037236820.1  receptor-type tyrosine-protein phosphatase U isoform X2

      Conserved Domains (7) summary
      smart00137
      Location:22 → 185
      MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
      smart00409
      Location:195 → 281
      IG; Immunoglobulin
      cd00063
      Location:385 → 480
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14632
      Location:941 → 1145
      R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
      cd14637
      Location:1230 → 1436
      R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
      pfam00041
      Location:493 → 576
      fn3; Fibronectin type III domain
      pfam18861
      Location:620 → 773
      PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J

    3. XM_037380922.1 → XP_037236819.1  receptor-type tyrosine-protein phosphatase U isoform X1

      Conserved Domains (7) summary
      smart00137
      Location:22 → 185
      MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
      smart00409
      Location:195 → 281
      IG; Immunoglobulin
      cd00063
      Location:385 → 480
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14632
      Location:941 → 1151
      R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
      cd14637
      Location:1236 → 1442
      R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
      pfam00041
      Location:493 → 576
      fn3; Fibronectin type III domain
      pfam18861
      Location:620 → 773
      PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J

    4. XM_037380926.1 → XP_037236823.1  receptor-type tyrosine-protein phosphatase U isoform X4

      Conserved Domains (7) summary
      smart00137
      Location:22 → 185
      MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
      smart00409
      Location:195 → 281
      IG; Immunoglobulin
      cd00063
      Location:385 → 480
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14632
      Location:931 → 1135
      R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
      cd14637
      Location:1220 → 1426
      R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
      pfam00041
      Location:493 → 576
      fn3; Fibronectin type III domain
      pfam18861
      Location:620 → 771
      PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.