U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    RABEP1 rabaptin, RAB GTPase binding effector protein 1 [ Manis javanica (Malayan pangolin) ]

    Gene ID: 108384851, updated on 14-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    RABEP1
    Gene description
    rabaptin, RAB GTPase binding effector protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Manis javanica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RABEP1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436117.1 (3860306..3973021, complement)
    100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016528352.1 (52760..124485)

    NW_023436117.1Genomic Context describing neighboring genes Neighboring gene complement C1q binding protein Neighboring gene RPA interacting protein Neighboring gene nucleoporin 88 Neighboring gene 60S ribosomal protein L6-like Neighboring gene 60S ribosomal protein L6-like Neighboring gene uncharacterized LOC118973998 Neighboring gene SLP adaptor and CSK interacting membrane protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    rab GTPase-binding effector protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference YNU_ManJav_2.0 Primary Assembly

    Genomic

    1. NW_023436117.1 Reference YNU_ManJav_2.0 Primary Assembly

      Range
      3860306..3973021 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037026859.1 → XP_036882754.1  rab GTPase-binding effector protein 1 isoform X5

      Conserved Domains (2) summary
      pfam03528
      Location:9 → 495
      Rabaptin
      pfam09311
      Location:521 → 755
      Rab5-bind; Rabaptin-like protein

    2. XM_037026858.1 → XP_036882753.1  rab GTPase-binding effector protein 1 isoform X4

      Conserved Domains (2) summary
      pfam03528
      Location:9 → 495
      Rabaptin
      pfam09311
      Location:533 → 790
      Rab5-bind; Rabaptin-like protein

    3. XM_037026855.1 → XP_036882750.1  rab GTPase-binding effector protein 1 isoform X1

      Conserved Domains (2) summary
      pfam03528
      Location:9 → 495
      Rabaptin
      pfam09311
      Location:533 → 829
      Rab5-bind; Rabaptin-like protein

    4. XM_037026857.1 → XP_036882752.1  rab GTPase-binding effector protein 1 isoform X3

      Conserved Domains (2) summary
      pfam03528
      Location:9 → 495
      Rabaptin
      pfam09311
      Location:533 → 829
      Rab5-bind; Rabaptin-like protein

    5. XM_037026856.1 → XP_036882751.1  rab GTPase-binding effector protein 1 isoform X2

      Conserved Domains (2) summary
      pfam03528
      Location:9 → 495
      Rabaptin
      pfam09311
      Location:533 → 839
      Rab5-bind; Rabaptin-like protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.