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    LOC118792700 CD2-associated protein [ Megalops cyprinoides (Indo-Pacific tarpon) ]

    Gene ID: 118792700, updated on 20-Mar-2024

    Summary

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    Gene symbol
    LOC118792700
    Gene description
    CD2-associated protein
    See related
    EnsemblRapid:ENSMCNG00005004103
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megalops cyprinoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Elopiformes; Megalopidae; Megalops
    Orthologs
    human zebrafish all
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    Genomic context

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    See LOC118792700 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current fMegCyp1.pri (GCF_013368585.1) 17 NC_050599.1 (13417974..13468226)

    Chromosome 17 - NC_050599.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor F5-like Neighboring gene tumor necrosis factor receptor superfamily, member 21 Neighboring gene opsin 5 Neighboring gene patched domain containing 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_050599.1 Chromosome 17 Reference fMegCyp1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CD2-associated protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megalops cyprinoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fMegCyp1.pri Primary Assembly

    Genomic

    1. NC_050599.1 Reference fMegCyp1.pri Primary Assembly

      Range
      13417974..13468226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036550602.1 → XP_036406495.1  CD2-associated protein isoform X1

      Conserved Domains (4) summary
      cd12053
      Location:3 → 53
      SH3_CD2AP_1; First Src Homology 3 domain (SH3A) of CD2-associated protein
      cd12054
      Location:114 → 168
      SH3_CD2AP_2; Second Src Homology 3 domain (SH3B) of CD2-associated protein
      PHA03247
      Location:418 → 576
      PHA03247; large tegument protein UL36; Provisional
      cl17036
      Location:277 → 333
      SH3; Src Homology 3 domain superfamily

    2. XM_036550603.1 → XP_036406496.1  CD2-associated protein isoform X2

      Related
      ENSMCNP00005009193.1, ENSMCNT00005009400.1
      Conserved Domains (4) summary
      PTZ00449
      Location:370 → 564
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      cd12053
      Location:3 → 53
      SH3_CD2AP_1; First Src Homology 3 domain (SH3A) of CD2-associated protein
      cd12054
      Location:114 → 168
      SH3_CD2AP_2; Second Src Homology 3 domain (SH3B) of CD2-associated protein
      cl17036
      Location:277 → 333
      SH3; Src Homology 3 domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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