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    LOC106627812 aspartyl/asparaginyl beta-hydroxylase [ Bactrocera oleae (olive fruit fly) ]

    Gene ID: 106627812, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC106627812
    Gene description
    aspartyl/asparaginyl beta-hydroxylase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bactrocera oleae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Daculus
    Orthologs
    fruit fly all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current MU_Boleae_v2 (GCF_001188975.3) Unplaced Scaffold NW_021667473.1 (235469..257700)
    100 previous assembly gapfilled_joined_lt9474.gt500.covgt10 (GCF_001188975.1) Unplaced Scaffold NW_013581226.1 (1741910..1762106, complement)

    NW_021667473.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated protein RP/EB family member 1 Neighboring gene CDGSH iron-sulfur domain-containing protein 3, mitochondrial Neighboring gene uncharacterized LOC106627843 Neighboring gene uncharacterized LOC118682202 Neighboring gene cholinesterase 1-like Neighboring gene uncharacterized LOC106627853

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Olive Fruit Fly Bactrocera oleae Transcriptome and Phylogenetic Classification of the Major Detoxification Gene Families. Pavlidi N, et al. PLoS One, 2013. PMID 23824998, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-aspartic acid 3-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-aspartic acid hydroxylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartyl/asparaginyl beta-hydroxylase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bactrocera oleae Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MU_Boleae_v2 Primary Assembly

    Genomic

    1. NW_021667473.1 Reference MU_Boleae_v2 Primary Assembly

      Range
      235469..257700
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036369867.1 → XP_036225760.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

      Conserved Domains (3) summary
      COG0457
      Location:795 → 1063
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:896 → 924
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1035 → 1187
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    2. XM_036369871.1 → XP_036225764.1  aspartyl/asparaginyl beta-hydroxylase isoform X5

      Conserved Domains (3) summary
      COG0457
      Location:769 → 1037
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:870 → 898
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1009 → 1161
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    3. XM_036369868.1 → XP_036225761.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

      Conserved Domains (3) summary
      COG0457
      Location:791 → 1059
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:892 → 920
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1031 → 1183
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    4. XM_036369869.1 → XP_036225762.1  aspartyl/asparaginyl beta-hydroxylase isoform X3

      Conserved Domains (3) summary
      COG0457
      Location:775 → 1043
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:876 → 904
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1015 → 1167
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

    5. XM_036369870.1 → XP_036225763.1  aspartyl/asparaginyl beta-hydroxylase isoform X4

      Conserved Domains (3) summary
      COG0457
      Location:771 → 1039
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:872 → 900
      TPR; TPR repeat [structural motif]
      pfam05118
      Location:1011 → 1163
      Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    Nucleotide Protein
    Heading Accession and Version

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