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    PtrM4_130040 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [ Pyrenophora tritici-repentis ]

    Gene ID: 6348005, updated on 10-Oct-2024

    Summary

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    Gene symbol
    PtrM4_130040
    Gene description
    FabB, 3-oxoacyl-(acyl-carrier-protein) synthase
    Locus tag
    PtrM4_130040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pyrenophora tritici-repentis (strain: M4, nat-host: Triticum aestivum)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora
    Old locus tag
    PTRG_09711
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    Genomic context

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    See PtrM4_130040 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Sequence:
    Chromosome: 7; NC_089396.1 (1567927..1570445, complement)

    Chromosome 7 - NC_089396.1Genomic Context describing neighboring genes Neighboring gene Dimer-Tnp-hAT domain containing protein Neighboring gene HoxN, High-affinity nickel permease Neighboring gene MET2, Homoserine acetyltransferase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_089396.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of the wheat fungal pathogen Pyrenophora tritici-repentis reveals chromosomal variations and genome plasticity. Moolhuijzen P, et al. BMC Genomics, 2018 Apr 23. PMID 29685100, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    FabB, 3-oxoacyl-(acyl-carrier-protein) synthase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_089396.1 Reference assembly

      Range
      1567927..1570445 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066108967.1 → XP_065960959.1  FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Pyrenophora tritici-repentis]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A834RQC5
    Nucleotide Protein
    Heading Accession and Version

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