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    LOC118509744 delta-sarcoglycan [ Anopheles stephensi (Asian malaria mosquito) ]

    Gene ID: 118509744, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC118509744
    Gene description
    delta-sarcoglycan
    See related
    VectorBase:ASTEI20_032327
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles stephensi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC118509744 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current UCI_ANSTEP_V1.0 (GCF_013141755.1) X NC_050201.1 (14383331..14394845, complement)

    Chromosome X - NC_050201.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118509735 Neighboring gene serine/threonine-protein kinase D3 Neighboring gene uncharacterized LOC118509755 Neighboring gene proton channel OtopLc-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_050201.1 Chromosome X Reference UCI_ANSTEP_V1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cardiac muscle tissue development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heart contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of sarcoglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    delta-sarcoglycan

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Anopheles stephensi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCI_ANSTEP_V1.0

    Genomic

    1. NC_050201.1 Reference UCI_ANSTEP_V1.0

      Range
      14383331..14394845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036050878.1 → XP_035906771.1  delta-sarcoglycan

      Conserved Domains (1) summary
      pfam04790
      Location:245 → 513
      Sarcoglycan_1; Sarcoglycan complex subunit protein
    Nucleotide Protein Strain
    Heading Accession and Version

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