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    PGN_RS05620 3-oxoacid CoA-transferase subunit B [ Porphyromonas gingivalis ATCC 33277 ]

    Gene ID: 29256377, updated on 24-Dec-2023

    Summary

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    Gene symbol
    PGN_RS05620
    Gene description
    3-oxoacid CoA-transferase subunit B
    Locus tag
    PGN_RS05620
    Gene type
    protein coding
    Organism
    Porphyromonas gingivalis ATCC 33277 (strain: ATCC 33277, type-material: type strain of Bacteroides gingivalis)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas
    Old locus tag
    PGN_1171
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    Genomic context

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    Sequence:
    NC_010729.1 (1302853..1303515)

    NC_010729.1Genomic Context describing neighboring genes Neighboring gene DNA mismatch repair protein MutS Neighboring gene lysine 5,6-aminomutase subunit alpha Neighboring gene OAM dimerization domain-containing protein Neighboring gene acyl-CoA dehydrogenase Neighboring gene electron transfer flavoprotein subunit beta/FixA family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_010729.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic repeats, misassembly and reannotation: a case study with long-read resequencing of Porphyromonas gingivalis reference strains. Acuña-Amador L, et al. BMC Genomics, 2018 Jan 16. PMID 29338683, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    3-oxoacid CoA-transferase subunit B

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010729.1 Reference assembly

      Range
      1302853..1303515
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012458079.1 3-oxoacid CoA-transferase subunit B [Porphyromonas gingivalis]

      See identical proteins and their annotated locations for WP_012458079.1

      UniProtKB/TrEMBL
      B2RJZ5
      Conserved Domains (1) summary
      TIGR02428
      Location:7 → 211
      pcaJ_scoB_fam; 3-oxoacid CoA-transferase, B subunit
    Nucleotide Protein
    Heading Accession and Version

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