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    LOC118319188 C-terminal-binding protein 1 [ Scophthalmus maximus (turbot) ]

    Gene ID: 118319188, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC118319188
    Gene description
    C-terminal-binding protein 1
    See related
    EnsemblRapid:ENSSMAG00025005980
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scophthalmus maximus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
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    Genomic context

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    See LOC118319188 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current ASM2237912v1 (GCF_022379125.1) 9 NC_061523.1 (19434036..19461451, complement)
    100 previous assembly ASM1334776v1 (GCF_013347765.1) 13 NC_049700.1 (6342447..6369829)

    Chromosome 9 - NC_061523.1Genomic Context describing neighboring genes Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene spondin 2b, extracellular matrix protein Neighboring gene heterogeneous nuclear ribonucleoprotein A0 Neighboring gene heterogeneous nuclear ribonucleoprotein A0-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2237912v1 Primary Assembly

    Genomic

    1. NC_061523.1 Reference ASM2237912v1 Primary Assembly

      Range
      19434036..19461451 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035649348.2 → XP_035505241.1  C-terminal-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8D3AEC4
      Related
      ENSSMAP00025019324.1, ENSSMAT00025020178.1
      Conserved Domains (1) summary
      cd05299
      Location:17 → 335
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    2. XM_035649349.2 → XP_035505242.1  C-terminal-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8D3AED3, A0A8D3C0H0
      Conserved Domains (1) summary
      cd05299
      Location:9 → 327
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    3. XM_035649347.2 → XP_035505240.1  C-terminal-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8D3AED3, A0A8D3C0H0, A0A8D3DDN1
      Related
      ENSSMAP00025019322.1, ENSSMAT00025020176.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 346
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    4. XM_035649351.2 → XP_035505244.1  C-terminal-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8D3AED3, A0A8D3C0H0
      Related
      ENSSMAP00025019291.1, ENSSMAT00025020145.1
      Conserved Domains (1) summary
      cd05299
      Location:9 → 327
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    5. XM_035649352.2 → XP_035505245.1  C-terminal-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8D3AEF0
      Related
      ENSSMAP00025019320.1, ENSSMAT00025020174.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 346
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    6. XM_035649353.2 → XP_035505246.2  C-terminal-binding protein 1 isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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