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    CTBP1 C-terminal binding protein 1 [ Cygnus atratus (black swan) ]

    Gene ID: 118248340, updated on 20-Mar-2024

    Summary

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    Gene symbol
    CTBP1
    Gene description
    C-terminal binding protein 1
    See related
    EnsemblRapid:ENSACYG00000011388
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cygnus atratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
    Orthologs
    human mouse all
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    Genomic context

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    See CTBP1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 4 NC_066365.1 (70512943..70747905)
    100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336606.1 (6387878..6617996, complement)

    Chromosome 4 - NC_066365.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118248327 Neighboring gene UV stimulated scaffold protein A Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC118248406 Neighboring gene spondin-2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Genomic

    1. NC_066365.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

      Range
      70512943..70747905
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_050710298.1 → XP_050566255.1  C-terminal-binding protein 1 isoform X1

    2. XM_050710296.1 → XP_050566253.1  C-terminal-binding protein 1 isoform X1

    3. XM_050710301.1 → XP_050566258.1  C-terminal-binding protein 1 isoform X6

    4. XM_050710302.1 → XP_050566259.1  C-terminal-binding protein 1 isoform X8

    5. XM_035547163.2 → XP_035403056.1  C-terminal-binding protein 1 isoform X2

      Related
      ENSACYP00000018602.1
      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    6. XM_050710297.1 → XP_050566254.1  C-terminal-binding protein 1 isoform X3

    7. XM_050710295.1 → XP_050566252.1  C-terminal-binding protein 1 isoform X1

    8. XM_050710303.1 → XP_050566260.1  C-terminal-binding protein 1 isoform X9

    9. XM_050710305.1 → XP_050566262.1  C-terminal-binding protein 1 isoform X12

    10. XM_050710304.1 → XP_050566261.1  C-terminal-binding protein 1 isoform X10

    11. XM_035547164.2 → XP_035403057.1  C-terminal-binding protein 1 isoform X4

      Conserved Domains (1) summary
      cd05299
      Location:28 → 346
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    12. XM_035547165.2 → XP_035403058.1  C-terminal-binding protein 1 isoform X5

      Conserved Domains (1) summary
      cd05299
      Location:28 → 346
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    13. XM_050710300.1 → XP_050566257.1  C-terminal-binding protein 1 isoform X7

    14. XM_035547171.2 → XP_035403064.1  C-terminal-binding protein 1 isoform X10

      Related
      ENSACYP00000018694.1
      Conserved Domains (1) summary
      cd05299
      Location:17 → 335
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    15. XM_035547166.2 → XP_035403059.1  C-terminal-binding protein 1 isoform X6

      Related
      ENSACYP00000018614.1
      Conserved Domains (1) summary
      cd05299
      Location:26 → 344
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    16. XM_035547168.2 → XP_035403061.1  C-terminal-binding protein 1 isoform X10

      Conserved Domains (1) summary
      cd05299
      Location:17 → 335
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    17. XM_050710299.1 → XP_050566256.1  C-terminal-binding protein 1 isoform X6

    18. XM_035547176.2 → XP_035403069.1  C-terminal-binding protein 1 isoform X11

      Conserved Domains (1) summary
      cd05299
      Location:17 → 335
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein
    Heading Accession and Version

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