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    LOC117914946 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [ Vitis riparia (riverbank grape) ]

    Gene ID: 117914946, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC117914946
    Gene description
    lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis riparia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC117914946 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) 5 NC_048435.1 (257746..270723)

    Chromosome 5 - NC_048435.1Genomic Context describing neighboring genes Neighboring gene FCS-Like Zinc finger 15 Neighboring gene protein DETOXIFICATION 55 Neighboring gene 60S ribosomal protein L18-2 Neighboring gene protein GAMETE EXPRESSED 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_048435.1 Chromosome 5 Reference EGFV_Vit.rip_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lipoic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EGFV_Vit.rip_1.0 Primary Assembly

    Genomic

    1. NC_048435.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

      Range
      257746..270723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034830471.1 → XP_034686362.1  lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial

      Conserved Domains (1) summary
      PLN02528
      Location:96 → 518
      PLN02528; 2-oxoisovalerate dehydrogenase E2 component
    Nucleotide Protein
    Heading Accession and Version

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